Worked Examples

Contents:

• Phantom Design
  • Phantom Customization
    • Specifying marker locations
    • Specifying a load region
    • Specifying a DSV
    • Specifying Guide Rods
  • Complete phantom design
• Marker Extraction
  • Basic examples
  • Comparing MarkerVolumes
  • Do we guarantee that we will find your markers?
  • Is that a major issue?
    • Editing marker positions in slicer
  • Handling Fat-water shift
• Marker Matching
  • Simple example
  • Next steps
  • An example of things not working well!
  • What should I do when the matching process fails?
  • Incorporating reverse gradient data
  • How to intepret the reverse gradient data
  • Creating the MarkerVolumes from dicom versus json
• Field Calculation
• Spherical Harmonics
  • some plotting examples
  • Explaining the code output:
  • Next steps
• Reporting
  • Case 1: passing data directly
  • Case 2: harmonic reconstruction
  • Adding custom tests
• Distortion Correction
  • But why isn’t the distortion correction better?!